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--- |
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language: |
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- en |
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bigbio_language: |
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- English |
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license: cc-by-2.0 |
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bigbio_license_shortname: CC_BY_2p0 |
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pretty_name: BioInfer |
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homepage: https://github.com/metalrt/ppi-dataset |
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bigbio_pubmed: True |
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bigbio_public: True |
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bigbio_tasks: |
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- RELATION_EXTRACTION |
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- NAMED_ENTITY_RECOGNITION |
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--- |
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# Dataset Card for BioInfer |
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## Dataset Description |
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- **Homepage:** https://github.com/metalrt/ppi-dataset |
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- **Pubmed:** True |
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- **Public:** True |
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- **Tasks:** Relation Extraction, Named Entity Recognition |
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|
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A corpus targeted at protein, gene, and RNA relationships which serves as a |
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resource for the development of information extraction systems and their |
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components such as parsers and domain analyzers. Currently, the corpus contains |
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1100 sentences from abstracts of biomedical research articles annotated for |
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relationships, named entities, as well as syntactic dependencies. |
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## Citation Information |
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|
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``` |
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@article{pyysalo2007bioinfer, |
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title = {BioInfer: a corpus for information extraction in the biomedical domain}, |
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author = { |
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Pyysalo, Sampo and Ginter, Filip and Heimonen, Juho and Bj{"o}rne, Jari |
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and Boberg, Jorma and J{"a}rvinen, Jouni and Salakoski, Tapio |
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}, |
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year = 2007, |
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journal = {BMC bioinformatics}, |
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publisher = {BioMed Central}, |
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volume = 8, |
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number = 1, |
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pages = {1--24} |
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} |
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|
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``` |
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