Update Dockerfile

Dockerfile

@@ -1,33 +1,33 @@
-FROM bioconductor/bioconductor_docker:RELEASE_3_19
-
-# Update apt-get and install necessary libraries
-RUN apt-get update \
-    && apt-get install -y libcurl4-openssl-dev libxml2-dev openjdk-11-jdk \
-    libcairo2-dev libxt-dev \
-    && apt-get clean \
-    && rm -rf /var/lib/apt/lists/*
-
-# Install R packages
-# Install R packages
-RUN R -e "install.packages(c('shinyjqui','BiocManager','remotes', 'devtools', 'shiny','shinyscreenshot', 'readr', 'shinyAce', 'ggplot2', 'dplyr', 'shinythemes', 'openintro', 'plotly', 'DT', 'ggprism', 'ggbeeswarm', 'shinyFiles', 'stringr', 'shinyBS', 'shinydashboard', 'shinyWidgets', 'tidyr', 'pheatmap', 'grid', 'gridExtra', 'ggeasy', 'ggtext', 'colorspace', 'shinyjqui', 'tidyverse', 'gprofiler2', 'colourpicker', 'shinydashboardPlus', 'jsonlite', 'reshape2'))"
-RUN R -e 'BiocManager::install("graph")'
-RUN R -e "source('https://install-github.me/dreamRs/esquisse')"
-
-# Install plumber and cyjshiny
-RUN R -e "install.packages(c('plumber','cyjShiny','svglite'))"
-
-COPY ./app/ui.R /srv/app/
-COPY ./app/server.R /srv/app/
-COPY ./app/plumber.R /srv/app/
-COPY ./app/R /srv/app/modules/
-COPY ./app/data /srv/app/pathwaymap/
-COPY ./app/svg /srv/app/svg/
-COPY ./app/www /srv/app/www/
-COPY ./scripts/start.sh /usr/local/bin/start.sh
-
-RUN chmod +x /usr/local/bin/start.sh
-
-EXPOSE 9000
-EXPOSE 1028
-
-CMD ["sh", "/usr/local/bin/start.sh"]
+FROM bioconductor/bioconductor_docker:RELEASE_3_19
+
+# Update apt-get and install necessary libraries
+RUN apt-get update \
+    && apt-get install -y libcurl4-openssl-dev libxml2-dev openjdk-11-jdk \
+    libcairo2-dev libxt-dev \
+    && apt-get clean \
+    && rm -rf /var/lib/apt/lists/*
+
+# Install R packages
+# Install R packages
+RUN R -e "install.packages(c('shinyjqui','BiocManager','remotes', 'devtools', 'shiny','shinyscreenshot', 'readr', 'shinyAce', 'ggplot2', 'dplyr', 'shinythemes', 'openintro', 'plotly', 'DT', 'ggprism', 'ggbeeswarm', 'shinyFiles', 'stringr', 'shinyBS', 'shinydashboard', 'shinyWidgets', 'tidyr', 'pheatmap', 'grid', 'gridExtra', 'ggeasy', 'ggtext', 'colorspace', 'shinyjqui', 'tidyverse', 'gprofiler2', 'colourpicker', 'shinydashboardPlus', 'jsonlite', 'reshape2'))"
+RUN R -e 'BiocManager::install("graph")'
+RUN R -e "source('https://install-github.me/dreamRs/esquisse')"
+
+# Install plumber and cyjshiny
+RUN R -e "install.packages(c('plumber','cyjShiny','svglite'))"
+
+COPY ./app/ui.R /srv/app/
+COPY ./app/server.R /srv/app/
+COPY ./app/plumber.R /srv/app/
+COPY ./app/R /srv/app/modules/
+COPY ./app/data /srv/app/pathwaymap/
+COPY ./app/svg /srv/app/svg/
+COPY ./app/www /srv/app/www/
+COPY ./scripts/start.sh /usr/local/bin/start.sh
+
+RUN chmod +x /usr/local/bin/start.sh
+
+EXPOSE 9000
+EXPOSE 7860
+
+CMD ["sh", "/usr/local/bin/start.sh"]