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adata.h5ad

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lightning_logs/version_0/events.out.tfevents.1733439071.Yoseflab-R13B.337477.39

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lightning_logs/version_0/events.out.tfevents.1733439275.Yoseflab-R13B.337477.40

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lightning_logs/version_0/hparams.yaml

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lightning_logs/version_1/events.out.tfevents.1733446113.Yoseflab-R13B.365372.40

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lightning_logs/version_1/hparams.yaml

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metrics.json

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 {
-    "cell_wise_cv": "| Metric                  | Training Value | Validation Value |\n|-------------------------|----------------|------------------|\n| Mean Absolute Error | 3.03  | 2.96           |\n| Pearson Correlation | 0.50  | 0.49  |\n| Spearman Correlation | 0.49 | 0.51  |\n| R\u00b2 (R-Squared) | -0.90  | -0.86      |",
-    "gene_wise_cv": "| Metric                  | Training Value |\n|-------------------------|----------------|\n| Mean Absolute Error | 27.62   |\n| Pearson Correlation | 0.66  |\n| Spearman Correlation | 0.69 |\n| R\u00b2 (R-Squared) | -1.85  |",
-    "diff_exp": "| Index | gene_f1 | lfc_mae | lfc_pearson | lfc_spearman | roc_auc | pr_auc | n_cells |\n| --- | --- | --- | --- | --- | --- | --- | --- |\n| fibroblast | 0.92 | 1.56 | 0.51 | 0.85 | 0.36 | 0.90 | 5557.00 |\n| macrophage | 0.90 | 1.39 | 0.53 | 0.85 | 0.32 | 0.88 | 5338.00 |\n| bladder urothelial cell | 0.90 | 1.45 | 0.64 | 0.90 | 0.45 | 0.91 | 4151.00 |\n| T cell | 0.82 | 2.65 | 0.56 | 0.76 | 0.28 | 0.87 | 2916.00 |\n| myofibroblast cell | 0.84 | 2.29 | 0.54 | 0.77 | 0.35 | 0.84 | 2078.00 |\n| plasma cell | 0.83 | 3.04 | 0.46 | 0.69 | 0.21 | 0.88 | 1141.00 |\n| mast cell | 0.92 | 3.33 | 0.53 | 0.67 | 0.26 | 0.81 | 1029.00 |\n| pericyte | 0.92 | 2.66 | 0.63 | 0.75 | 0.32 | 0.79 | 875.00 |\n| mature NK T cell | 0.66 | 3.83 | 0.54 | 0.70 | 0.45 | 0.88 | 508.00 |\n| smooth muscle cell | 0.89 | 4.14 | 0.58 | 0.67 | 0.33 | 0.84 | 290.00 |\n| vein endothelial cell | 0.83 | 3.74 | 0.59 | 0.68 | 0.42 | 0.80 | 278.00 |\n| B cell | 0.65 | 4.32 | 0.53 | 0.58 | 0.36 | 0.74 | 253.00 |\n| capillary endothelial cell | 0.78 | 3.92 | 0.64 | 0.67 | 0.41 | 0.76 | 77.00 |\n| endothelial cell of lymphatic vessel | 0.62 | 5.29 | 0.56 | 0.55 | 0.36 | 0.71 | 74.00 |\n| plasmacytoid dendritic cell | 0.36 | 6.84 | 0.43 | 0.36 | 0.36 | 0.74 | 18.00 |"
+    "cell_wise_cv": "| Metric                  | Training Value | Validation Value |\n|-------------------------|----------------|------------------|\n| Mean Absolute Error | 3.03  | 3.04           |\n| Pearson Correlation | 0.50  | 0.49  |\n| Spearman Correlation | 0.49 | 0.49  |\n| R\u00b2 (R-Squared) | -0.90  | -0.76      |",
+    "gene_wise_cv": "| Metric                  | Training Value |\n|-------------------------|----------------|\n| Mean Absolute Error | 27.68   |\n| Pearson Correlation | 0.66  |\n| Spearman Correlation | 0.69 |\n| R\u00b2 (R-Squared) | -1.83  |",
+    "diff_exp": "| Index | gene_f1 | lfc_mae | lfc_pearson | lfc_spearman | roc_auc | pr_auc | n_cells |\n| --- | --- | --- | --- | --- | --- | --- | --- |\n| fibroblast | 0.92 | 1.58 | 0.50 | 0.86 | 0.36 | 0.90 | 5557.00 |\n| macrophage | 0.88 | 1.38 | 0.52 | 0.86 | 0.32 | 0.88 | 5338.00 |\n| bladder urothelial cell | 0.91 | 1.53 | 0.59 | 0.90 | 0.45 | 0.92 | 4151.00 |\n| T cell | 0.81 | 2.61 | 0.57 | 0.77 | 0.28 | 0.87 | 2916.00 |\n| myofibroblast cell | 0.83 | 2.39 | 0.51 | 0.77 | 0.36 | 0.84 | 2078.00 |\n| plasma cell | 0.85 | 2.89 | 0.51 | 0.73 | 0.21 | 0.88 | 1141.00 |\n| mast cell | 0.93 | 3.27 | 0.53 | 0.65 | 0.26 | 0.81 | 1029.00 |\n| pericyte | 0.93 | 2.68 | 0.63 | 0.75 | 0.32 | 0.79 | 875.00 |\n| mature NK T cell | 0.68 | 3.80 | 0.55 | 0.69 | 0.46 | 0.88 | 508.00 |\n| smooth muscle cell | 0.88 | 4.29 | 0.56 | 0.67 | 0.33 | 0.83 | 290.00 |\n| vein endothelial cell | 0.84 | 3.64 | 0.60 | 0.70 | 0.40 | 0.79 | 278.00 |\n| B cell | 0.69 | 4.63 | 0.49 | 0.54 | 0.38 | 0.75 | 253.00 |\n| capillary endothelial cell | 0.75 | 3.95 | 0.64 | 0.66 | 0.41 | 0.75 | 77.00 |\n| endothelial cell of lymphatic vessel | 0.64 | 5.45 | 0.54 | 0.53 | 0.36 | 0.71 | 74.00 |\n| plasmacytoid dendritic cell | 0.35 | 6.57 | 0.45 | 0.39 | 0.35 | 0.74 | 18.00 |"
 }